Error: The following cell IDs are missing in predictions:

Competition Broad Institute Crunch #1
1

Hi, I got the following error after running the main.py on AWS.

Error: The following cell IDs are missing in predictions: 159259, 156928, 131975, 119611, 66832, 150167, 159222, 122153, 118617, 97420

It seems that some cell IDs are being filtered out during preprocessing. Debugging is difficult without identifying the samples these IDs belong to. Could you update the logging messages to include this information? Thank you!

2

Also is the list of cell ids complete or do you return the first 10 missing?

3

I will fix it today if I have time (or tomorrow for sure).
It limits the list to the first 10. I will also include the number of total missing IDs to help.

4

Thanks. You can lower the priority of this issue. In my case, the problem was that I was treating the cell IDs as strings instead of integers.

5

We will also add types as a check.

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